Class GoldbergMaximumDensitySubgraphAlgorithmNodeWeights<V extends Pair<?,Double>,E>
- Type Parameters:
V- Type of verticesE- Type of edges
- All Implemented Interfaces:
MaximumDensitySubgraphAlgorithm<V,E>
The basic concept is to construct a network that can be used to compute the maximum density subgraph using a binary search approach.
This variant of the algorithm assumes the density of a positive real edge and vertex weighted
graph G=(V,E) to be defined as \[\frac{\sum\limits_{e \in E} w(e) + \sum\limits_{v \in V}
w(v)}{\left|{V}\right|}\] and sets the weights of the network from
GoldbergMaximumDensitySubgraphAlgorithmBase as proposed in the above paper. For this case
the weights of the network must be chosen to be: \[c_{ij}=w(ij)\,\forall \{i,j\}\in E\]
\[c_{it}=m'+2g-d_i-2w(i)\,\forall i \in V\] \[c_{si}=m'\,\forall i \in V\] where $m'$ is such
that all weights are positive and $d_i$ is the degree of vertex $i$ and $w(v)$ is the weight of
vertex $v$.
For details see GoldbergMaximumDensitySubgraphAlgorithmBase. All the math to prove the
correctness of these weights is the same.
Because the density is per definition guaranteed to be rational, the distance of 2 possible
solutions for the maximum density can't be smaller than $\frac{1}{W(W-1)}$. This means shrinking
the binary search interval to this size, the correct solution is found. The runtime can in this
case be given by $O(M(n,n+m)\log{W})$, where $M(n,m)$ is the runtime of the internally used
MinimumSTCutAlgorithm and $W$ is the sum all edge and vertex weights from $G$.
- Author:
- Andre Immig
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Field Summary
Fields inherited from class org.jgrapht.alg.densesubgraph.GoldbergMaximumDensitySubgraphAlgorithmBase
graph, guess -
Constructor Summary
ConstructorsConstructorDescriptionConvenience constructor that uses PushRelabel as default MinimumSTCutAlgorithmGoldbergMaximumDensitySubgraphAlgorithmNodeWeights(Graph<V, E> graph, V s, V t, double epsilon, Function<Graph<V, DefaultWeightedEdge>, MinimumSTCutAlgorithm<V, DefaultWeightedEdge>> algFactory) Constructor -
Method Summary
Modifier and TypeMethodDescriptionprotected doubleprotected doubleprotected doubleGetter for network weights of edges su for u in Vprotected doubleGetter for network weights of edges ut for u in VMethods inherited from class org.jgrapht.alg.densesubgraph.GoldbergMaximumDensitySubgraphAlgorithmBase
calculateDensest, getDensity
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Constructor Details
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GoldbergMaximumDensitySubgraphAlgorithmNodeWeights
public GoldbergMaximumDensitySubgraphAlgorithmNodeWeights(Graph<V, E> graph, V s, V t, double epsilon, Function<Graph<V, DefaultWeightedEdge>, MinimumSTCutAlgorithm<V, DefaultWeightedEdge>> algFactory) Constructor- Parameters:
graph- input for computations- additional source vertext- additional target vertexepsilon- to use for internal computationalgFactory- function to construct the subalgorithm
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GoldbergMaximumDensitySubgraphAlgorithmNodeWeights
public GoldbergMaximumDensitySubgraphAlgorithmNodeWeights(Graph<V, E> graph, V s, V t, double epsilon) Convenience constructor that uses PushRelabel as default MinimumSTCutAlgorithm- Parameters:
graph- input for computations- additional source vertext- additional target vertexepsilon- to use for internal computation
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Method Details
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computeDensityNumerator
- Specified by:
computeDensityNumeratorin classGoldbergMaximumDensitySubgraphAlgorithmBase<V extends Pair<?,Double>, E> - Parameters:
g- the graph to compute the numerator density from- Returns:
- numerator part of the density
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computeDensityDenominator
- Specified by:
computeDensityDenominatorin classGoldbergMaximumDensitySubgraphAlgorithmBase<V extends Pair<?,Double>, E> - Parameters:
g- the graph to compute the denominator density from- Returns:
- numerator part of the density
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getEdgeWeightFromSourceToVertex
Description copied from class:GoldbergMaximumDensitySubgraphAlgorithmBaseGetter for network weights of edges su for u in V- Specified by:
getEdgeWeightFromSourceToVertexin classGoldbergMaximumDensitySubgraphAlgorithmBase<V extends Pair<?,Double>, E> - Parameters:
v- of V- Returns:
- weight of the edge (s,v)
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getEdgeWeightFromVertexToSink
Description copied from class:GoldbergMaximumDensitySubgraphAlgorithmBaseGetter for network weights of edges ut for u in V- Specified by:
getEdgeWeightFromVertexToSinkin classGoldbergMaximumDensitySubgraphAlgorithmBase<V extends Pair<?,Double>, E> - Parameters:
v- of V- Returns:
- weight of the edge (v,t)
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